Preparation of acrylamide solutions for casting of gels
Standard Protocol for Casting SDS PAGE Gels
Solution of Acrylamide and N, N'-Methylenbisycrylamide
Cat. No. | Composition Acrylamide:Bis |
% C | % T | Applications |
10679 | 19:1 | 5.0 | 40 | DNA Sequencing |
10680 | 29:1 | 3.3 | 40 | IEF, SDS PAGE |
10681 | 37.5:1 | 2.6 | 40 | SDS PAGE |
10687 | 29:1 | 3.3 | 30 | IEF, SDS AGE |
10688 | 37.5:1 | 2.6 | 30 | SDS PAGE |
The SERVA Acrylamide/Bis solutions are applicable to all PAGE methods. Acrylamide/Bis solution 29:1 is also suitable for preparation of a gel according to Schägger and Jagow 1). The amount of gel solutions (20 ml) is sufficient for 2 vertical slab mini gels (100 mm x 80 mm x 1,4 mm).
Product |
For final concenration of gel (% T)
|
Stacking gel
|
||||||||
7 % |
10 % |
12.5 % |
15 % |
5 % |
||||||
30 %* |
40 %* |
30 % |
40 % |
30 % |
40 % |
30 % |
40 % |
30 % |
40 % |
|
Acrylamide/Bis
|
2.33 ml |
1.75 ml |
3.33 ml |
2.50 ml |
4.17 ml |
3.13 ml |
5.00 ml |
3.75 ml |
1.67 ml |
1.25 ml |
Seperating gel
|
2.50 ml |
2.50 ml |
2.50 ml |
2.50 ml |
2.50 ml |
2.50 ml |
2.50 ml |
2.50 ml |
— |
— |
Stacking gel
|
— |
— |
— |
— |
— |
— |
— |
— |
2.50 ml |
2.50 ml |
dist. H2O |
5.07 ml |
5.65 ml |
4.03 ml |
4.90 ml |
3.29 ml |
4.27 ml |
2.46 ml |
3.65 ml |
5.79 ml |
6.15 ml |
SDS, 10 % Solution
|
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
0.1 ml |
TEMED
|
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
0.015 ml |
APS, 10 % Solution
|
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
0.03 ml |
*The composition of the acrylamide/bis solution (acrylamide content: Crosslinker) depends on the application.
For standard SDS-PAGE, we recommend the Acrylamide/Bis Solution 29:1 (cat. no. 10680) or 37.5:1 (cat. no. 10681).
Required Buffers
Seperation gel buffer, 4x (1,5 M Tris/HCI pH 8.8)
• Dissolve 18.2 g Tris (cat. no. 37190) in water (bidest.)
• Adjust pH 8.8 (approx. 2.8 ml HCl, 32 %)
Stacking gel buffer, 4 x (0,5 M Tris/HCI pH 6.8)
• Dissolve 6.1 g Tris (cat. no. 37190) in water (bidest.)
• Adjust pH 6.8 (approx. 4.4 ml HCl, 32 %)
Preparation
- Mix acrylamide/bis solution, buffer and water in separate beakers.
- Deaerate the solutions briefly (1 to 3 min ad vacuo).
- Add to separating gel solution: 10 % SDS solution (w/v in water), TEMED and APS solution (w/v 10 % of ammonium persulfate), gently swirl to mix without incorporating air into the mixture.
- Casting the separating gel: fill slab gel sandwich with separating gel solution up to approx. two thirds. The remaining volume for the stacking gel should refer to a separation distance of 1.5-fold of the depth of the wells of the comb to be used. Overlay with isopropanol immediately (0.1 ml), let polymerize (approx. 15 - 20 min).
- Add 10 % SDS in water to the stacking gel solution, then TEMED and 10 % ammonium persulfate solution (APS), swirl gently to mix without incorporating air into the mixture.
- Casting the stacking gel: fill up the slab gel sandwich to the top and let polymerize.